Special Issues

Microorganisms publishes Special Issues to create collections of papers on specific topics, with the aim of building a community of authors and readers to discuss the latest research and develop new ideas and research directions. Special Issues are led by Guest Editors, who are experts on the topic. The journal’s Editor-in-Chief and/or designated EBM will oversee Guest Editor appointments and Special Issue proposals, checking their content for relevance and ensuring the suitability of the material for the journal. The papers published in a Special Issue will be collected and displayed on a dedicated page of the journal’s website. For any inquiries related to a Special Issue, please contact the Editorial Office.

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Soil Fungi in Sustainable Agriculture, 2nd Edition
edited by
submission deadline 31 Oct 2024 | Viewed by 57 | Submission Open
Keywords: plant beneficial microorganisms; plant– fungi interactions; biofertilizers; inoculants; biocontrol agents
(This special issue belongs to the Section Plant Microbe Interactions)
Human Infectious Diseases
edited by
submission deadline 31 Oct 2024 | Viewed by 56 | Submission Open
Keywords: human; infectious diseases; public health
(This special issue belongs to the Section Public Health Microbiology)
Extracellular Matrix of Microbial Biofilms
edited by Wei Hu
submission deadline 31 Oct 2024 | Viewed by 53 | Submission Open
Keywords: microbial cells; extracellular matrix; cell adhesion; microbial biofilms
(This special issue belongs to the Section Biofilm)
Advances in Research on Waterborne Pathogens
edited by Ashwini S. Kucknoor
submission deadline 31 Oct 2024 | Viewed by 50 | Submission Open
Keywords: waterborne pathogens; pathogen detection; antimicrobial resistance; public health
(This special issue belongs to the Section Environmental Microbiology)
Advances in Host-Gut Microbiota
edited by
submission deadline 31 Oct 2024 | Viewed by 49 | Submission Open
Keywords: host– microbiota interactions; infectious and inflammatory gut disorders; microbiota ageing; intestinal epithelium
(This special issue belongs to the Section Gut Microbiota)
New Methods in Microbial Research 4.0
edited by and Alba Cuecas
submission deadline 31 Oct 2024 | Viewed by 45 | Submission Open
Keywords: method; microbiology; microbial world; microbial community; novel techniques; microorganisms; omics; microscopy; growth rate; microbial metabolism; microbial monitoring; microbiome; gene expression; comparative genomics; lateral gene transfer; biofilms; microbial interactions; microbial biogeography; single-cell analysis
(This special issue belongs to the Section Systems Microbiology)
Advances in Porcine Virus: From Pathogenesis to Control Strategies
edited by
submission deadline 31 Oct 2024 | Viewed by 45 | Submission Open
Keywords: pathogenesis; porcine viruses; African swine fever virus; zoonotic potential; antivirals; porcine reproductive and respiratory syndrome virus
(This special issue belongs to the Section Veterinary Microbiology)
Epidemiology, Genetic Diversity, and Detection of Intestinal Parasites
edited by Rosa Maria Bermúdez-Cruz
submission deadline 31 Oct 2024 | Viewed by 42 | Submission Open
Keywords: parasite; intestinal parasitic infections; genetic diversity; epidemiology; prevalence; detection
(This special issue belongs to the Section Parasitology)
Waterborne Pathogen Infection and Antibiotic Resistance
edited by Louise Weaver
submission deadline 31 Oct 2024 | Viewed by 42 | Submission Open
Keywords: waterborne pathogen; waterborne diseases; drinking water; antibiotic resistance; public health and epidemiology
(This special issue belongs to the Section Antimicrobial Agents and Resistance)
Gut Microbiota and Foreign Substances: Drugs, Mycotoxins and Heavy Metals in Foods submission deadline 31 Oct 2024 | Viewed by 39 | Submission Open
Keywords: gut microbiota; foreign substances in food; xenobiotics; food mycotoxins; heavy metals; probiotics; pathogenic microorganisms; intestinal inflammation
(This special issue belongs to the Section Gut Microbiota)
The Molecular Epidemiology of Infectious Diseases
edited by Jonathan Hon-kwan Chen
submission deadline 31 Oct 2024 | Viewed by 29 | Submission Open
Keywords: molecular epidemiology; infectious diseases; outbreak investigations; transmission; genotyping; disease control
(This special issue belongs to the Section Public Health Microbiology)
Yeast Genetics and Proteomics
edited by Joao A. A. Paulo and Valentina Rossio
submission deadline 31 Oct 2024 | Viewed by 26 | Submission Open
Keywords: yeast; proteomics; genetics; cell cycle regulation; CRISPR technologies; cellular pathways; post-translational modifications
(This special issue belongs to the Section Molecular Microbiology and Immunology)
The Role of Lactic Acid Bacteria and Their Metabolites in Fermented Foods: From Mechanisms of Action to Technological Applications and Human Health Effects.
edited by
submission deadline 31 Oct 2024 | Submission Open
Keywords: LAB; fermentation; fermented foods; metabolites; health benefits
(This special issue belongs to the Section Food Microbiology)
The Notion of Microalgal Bio-Refinery: Transitioning from Wastewater Treatment to By-Products Recovery
edited by Giovanni Antonio Lutzu
submission deadline 15 Nov 2024 | Viewed by 171 | Submission Open
Keywords: microalgae; mixotrophy; heterotrophy; bio-products; wastewater treatment; nutraceuticals; pharmaceuticals; biostimulants; bioplastics; biodiesel
(This special issue belongs to the Section Environmental Microbiology)
Aquatic Microorganisms and Their Application in Aquaculture
edited by
submission deadline 15 Nov 2024 | Viewed by 148 | Submission Open
Keywords: aquatic microorganisms; aquaculture; aquafeed
(This special issue belongs to the Section Environmental Microbiology)
Research on Diseases of Aquatic Organisms
edited by Geovana Dotta, and
submission deadline 15 Nov 2024 | Viewed by 72 | Submission Open
Keywords: conservation and welfare of aquatic animals; ecotoxicology of aquatic environments; amphibian health and diseases; crustacean health and diseases; fish health and diseases; health and diseases of bivalve mollusks; health and diseases of other aquatic animals
(This special issue belongs to the Section Veterinary Microbiology)
Dairy Food and Microorganisms: The Role of Microorganisms in Improving the Safety, Quality and Nutritional Value of Dairy Foods
edited by , and Loreta Šernienė
submission deadline 15 Nov 2024 | Viewed by 63 | Submission Open
Keywords: dairy foods; whey valorization; probiotic microorganisms; edible coatings; bioactive compounds; lactic acid bacteria; immobilization; encapsulation; safety
(This special issue belongs to the Section Food Microbiology)
Lactic Acid Bacteria in Food Fermentation and Biotechnology submission deadline 15 Nov 2024 | Viewed by 58 | Submission Open
Keywords: genomics; transcriptomics; metabolomics; cell factories; bioactive compounds
(This special issue belongs to the Section Microbial Biotechnology)
Tick-Borne Diseases and Zoonotic Diseases
edited by Andras Lakos
submission deadline 15 Nov 2024 | Viewed by 33 | Submission Open
Keywords: tick; tick-borne diseases; Lyme disease; Lyme borreliosis; chronic Lyme disease; post-treatment Lyme disease; Borrelia burgdorferi; epidemiology; zoonosis
(This special issue belongs to the Section Medical Microbiology)
Insight into Bacterial Pathogens: Pathogenesis and Host Response submission deadline 15 Nov 2024 | Viewed by 10 | Submission Open
Keywords: bacterial pathogenesis; virulence factors; host– pathogen interaction; immune response; antibiotic resistance; virulence regulation
(This special issue belongs to the Section Molecular Microbiology and Immunology)
Benefits of Antimicrobial Phytoextracts in the Fight to Foodborne Pathogens submission deadline 15 Nov 2024 | Viewed by 5 | Submission Open
Keywords: antimicrobial botanical agents; phytoextracts; foodborne pathogens; phytotherapeutic medicine; botanical food preservatives; food safety; natural antimicrobial agents; safe food preservation approach; bio-based food antimicrobials
(This special issue belongs to the Section Antimicrobial Agents and Resistance)
Viral Diseases: Current Research and Future Directions submission deadline 15 Nov 2024 | Submission Open
Keywords: RNA viruses; DNA viruses; virus– host interactions; immune evasion strategies; host immune response; viral epidemiology; biology and pathogenesis; virus diagnosis; viral diseases; prevention; management and treatment strategies; antiviral therapeutics; vaccine development
(This special issue belongs to the Section Virology)
Phloem Localized Insect Transmitted Bacteria Associated with Plant Diseases
edited by
submission deadline 30 Nov 2024 | 4 articles | Viewed by 3217 | Submission Open
Keywords: phytopathogenic bacteria; ‘ Candidatus Phytoplasma’ species; ‘ Candidatus Liberibacter’ species and subspecies; plant disease; prevention; management; detection; identification; insect vectors
(This special issue belongs to the Section Plant Microbe Interactions)
Evaluation of Risks of Microbiological Origin Associated with Food Consumption 3.0 submission deadline 30 Nov 2024 | 1 articles | Viewed by 671 | Submission Open
Keywords: food safety; food consumption; food preparation; food handling; microbiological risk assessment; predictive microbiology
(This special issue belongs to the Section Food Microbiology)
Recent Advances in Clostridioides difficile Infection submission deadline 30 Nov 2024 | 1 articles | Viewed by 649 | Submission Open
Keywords: Clostridioides difficile infection; healthcare-associated infection; CDI treatment; virulence factors; pathogenesis; host interactions; antibiotic resistance
(This special issue belongs to the Section Medical Microbiology)
Microorganisms: A Way Forward for Sustainable Development?
edited by Akhilesh Kumar Chaurasia
submission deadline 30 Nov 2024 | 1 articles | Viewed by 318 | Submission Open
Keywords: microorganisms; microbial biotechnology; sustainability; genetically engineered microbes
(This special issue belongs to the Section Microbial Biotechnology)
Microbial Metabolic Engineering Technology
edited by Kesen Ma
submission deadline 30 Nov 2024 | Viewed by 115 | Submission Open
Keywords: metabolic engineering; synthetic biology tools; genome engineering; synthetic metabolic pathways; enzyme engineering
(This special issue belongs to the Section Microbial Biotechnology)
Advances in Parvovirus Infection of Pets and Waterfowl
edited by
submission deadline 30 Nov 2024 | Viewed by 61 | Submission Open
Keywords: parvovirus; genetic evolution; pathogenicity; parvovirus– host interaction; epidemiology; genetic characterization; phylogeny; detection methods; vaccine; diagnostic preparations
(This special issue belongs to the Section Veterinary Microbiology)
Potential Antimicrobial Synergistic Interactions of Natural Products
edited by and Alexia Barbarossa
submission deadline 30 Nov 2024 | Viewed by 37 | Submission Open
Keywords: antimicrobial resistance; synergistic effect; natural substances
(This special issue belongs to the Section Antimicrobial Agents and Resistance)
Bacterial Virulence and Biosurfactants
edited by
submission deadline 30 Nov 2024 | Viewed by 32 | Submission Open
Keywords: multi-resistant bacteria (MDR); resistance mechanisms; antibiotics; antimicrobial agents; drug susceptibility; green surfactants; medicinal plants; microbial nanoparticles
(This special issue belongs to the Section Antimicrobial Agents and Resistance)
Detection and Analysis of Clinical Microbial Infections, Second Edition
edited by
submission deadline 30 Nov 2024 | Viewed by 25 | Submission Open
Keywords: microorganisms’ detection and analysis; clinical microbiology; identification technologies; new identification methods; heterogeneous dissemination; unculturable pathogens; mixed microbial populations; new emerging pathogens; genomics; transcriptomics; proteomics; metabolomics; standardization of testing; sample data centralization
(This special issue belongs to the Section Medical Microbiology)
Applied Gut Molecular Microbiology Technology
edited by and
submission deadline 30 Nov 2024 | Viewed by 24 | Submission Open
Keywords: gut microorganisms; applied microbiology; probiotics
(This special issue belongs to the Section Microbial Biotechnology)
Advances in Toxoplasma gondii and Toxoplasmosis
edited by and Jorge Enrique Gómez Marín
submission deadline 30 Nov 2024 | Viewed by 22 | Submission Open
Keywords: Toxoplasma gondii; toxoplasmosis; immune response; diagnosis; treatment; epidemiology
(This special issue belongs to the Section Parasitology)
Contemporary Perspectives on Bacterial Virulence Factors
edited by Matthew Jackson and Kevin Theis
submission deadline 30 Nov 2024 | Viewed by 13 | Submission Open
Keywords: bacterial pathogens; virulence factors; immune response; staphylococcus aureus; pseudomonas aeruginosa
(This special issue belongs to the Section Molecular Microbiology and Immunology)
Novel Approaches in the Diagnosis and Control of Emerging Pathogens
edited by and Andrea Rocchetti
submission deadline 30 Nov 2024 | Viewed by 6 | Submission Open
Keywords: one Health approach; sequencing; point of care testing; emerging pathogens; rapid diagnosis; surveillance strategies
(This special issue belongs to the Section Medical Microbiology)
Editorial Board Members’ Collection Series: Hepatitis Viruses: Who They Are and Consequences submission deadline 30 Nov 2024 | Viewed by 3 | Submission Open
Keywords: viral hepatitis; liver; pathogenesis; cancer; fibrosis; natural history; treatments; epidemiology; vaccine; genotypes
(This special issue belongs to the Section Virology)
Cutting-Edge Antimicrobial Peptide Research: Innovations in Production, Design, and Applications
edited by Xristo Zarate
submission deadline 30 Nov 2024 | Viewed by 3 | Submission Open
Keywords: antimicrobial peptides; protein expression; peptide purification; molecular design; antimicrobial activity; therapeutic applications; bioengineering; microbial resistance
(This special issue belongs to the Section Antimicrobial Agents and Resistance)
Microbiologically Influenced Corrosion
edited by Yingchao Li and
submission deadline 30 Nov 2024 | Viewed by 2 | Submission Open
Keywords: biofilms; corrosion; microbial communities; microbiologically influenced corrosion (MIC); biofilm inhibition and control; early detection
(This special issue belongs to the Section Environmental Microbiology)
Plant and Microbial Interactions in Soil Remediation
edited by Xia Li and Rongrong Xie
submission deadline 30 Nov 2024 | Submission Open
Keywords: plant and microbial interactions; soil remediation; heavy metals; organic pollutants
(This special issue belongs to the Section Plant Microbe Interactions)
Overview of Healthcare-Associated Infections submission deadline 30 Nov 2024 | Submission Open
Keywords: infection; healthcare; public health
(This special issue belongs to the Section Medical Microbiology)
Biosynthesis of Plant-Derived Bioactive Components by Photosynthetic Microorganisms
edited by and
submission deadline 15 Dec 2024 | 1 articles | Viewed by 478 | Submission Open
Keywords: photosynthetic bacteria; biosynthsis; bioactive compounds; metabolic engineering
(This special issue belongs to the Section Microbial Biotechnology)
Pathogenic Biofilms: Physiology, Molecular Mechanisms and Counter Strategies submission deadline 15 Dec 2024 | Viewed by 133 | Submission Open
Keywords: pathogenic biofilm; planktonic and sessile cells; antiadhesive and antifouling strategies; quorum sensing; quorum quenching; extracellular polymeric substances (EPSs); phage therapy
(This special issue belongs to the Section Biofilm)
Microorganisms and Cultural Heritage: From Deterioration to Preservation Protocols submission deadline 20 Dec 2024 | 3 articles | Viewed by 6477 | Submission Open
Keywords: stone monuments; wooden artefacts; paper; subterranean cultural heritage sites; textile; metal biocorrosion; microbial enzymes; museum collections; glass; underwater cultural heritage
(This special issue belongs to the Section Environmental Microbiology)
Epidemiology of Leptospira sp. Infection: Current Status, Insights and Future Prospects 2.0 submission deadline 20 Dec 2024 | 3 articles | Viewed by 2405 | Submission Open
Keywords: Leptospira sp.; leptospirosis; epidemiology; control; environment; diagnosis
(This special issue belongs to the Section Parasitology)
Advances in Halophilic Microorganisms submission deadline 30 Dec 2024 | Viewed by 25 | Submission Open
Keywords: halophilic; microbe; extremophiles; biotechnology; taxonomy and biodiversity
(This special issue belongs to the Section Environmental Microbiology)
Plant-Microbe Interaction State-of-the-Art Research in China
edited by , Huiquan Liu, Xianbing Wang and
submission deadline 31 Dec 2024 | 13 articles | Viewed by 12219 | Submission Open
Keywords: plant disease; virus; bacteria; fungi; microbiome; genome editing; vector-borne disease; pathogenesis; plant immunity; virulence regulation
(This special issue belongs to the Section Plant Microbe Interactions)
Infections in Solid Organ Transplant Recipients
edited by
submission deadline 31 Dec 2024 | 3 articles | Viewed by 2342 | Submission Open
(This special issue belongs to the Section Medical Microbiology)
Latest Review Papers in Plant Microbe Interactions 2024 submission deadline 31 Dec 2024 | 1 articles | Viewed by 1403 | Submission Open
Keywords: endophytes; pathogens; rhizobacteria; plant microbiology
(This special issue belongs to the Section Plant Microbe Interactions)
Foodborne Pathogens: Detection Methods, Food Safety, and Public Health 2.0 submission deadline 31 Dec 2024 | 2 articles | Viewed by 998 | Submission Open
Keywords: foodborne pathogens; bacteria; viruses; parasites; detection methods; virulence; pathogenicity; food safety; public health
(This special issue belongs to the Section Food Microbiology)
Latest Review Papers in Virology 2024
edited by
submission deadline 31 Dec 2024 | Viewed by 255 | Submission Open
Keywords: antivirals and vaccines; cell biology; chronic/persistent viral diseases; detection and diagnosis; disease and viral pathogenesis; ecology; emerging and neglected viruses/viral diseases; epidemiology and public health; host response; host– virus interactions; immunology; laboratory methods; molecular virology; pathology; phylogenetics and molecular genetics; preclinical studies; viral lifecycle and particle morphology; virus evolution; zoonotic diseases
(This special issue belongs to the Section Virology)
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